Template-based Modeling Results for YHIQ_ECOLI

Submitted Primary Sequence

>Length 250
MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
4411001222223210120033121322332200000123101012233342120000011000011231322311200200213332202000000100100000011102010011121001002200110221131002013201001000110023023211000000112343321223210200121012322130002102211221000221321321232212110213111000101345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
1	MUSTER	2pkwA	0.934	0.968	3.189	threading_1	-QICL-DETGATDGALSVLAARWGLEHDEDNP--ALVTPQHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRL-ERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITPRPQVVYLDP-FPHRQKSALVKKE-RVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIYAGTPL
2	SPARKS	2oyra	0.958	0.956	5.554	threading_2	-KICLIDETGAGDGALSVLAARWGLEHDEDN-LALVLTPEHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRL-ERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPFPHK-------QKKERVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
3	PROSPECT2	2oyrA	0.958	0.956	4.146	threading_3	-KICLIDETGAGDGALSVLAARWGLEHDEDNL-ALVLTPEHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRV-RLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPFPHKQKKER-------VFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
4	PPA-I	2pkwA	0.926	0.968	5.308	threading_4	-QICL-DETGATDGALSVLAARWGLEHDEDNP--ALVTPQHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRL-ERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPF-PHRQKSALVKK-ERVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIYAGTPL
5	HHPRED-l	2oyr_A	0.996	0.952	5.967	threading_5	-KICLIDETGAGDGALSVLAARWGLEHDEDNL-ALVLTPEHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVR-LERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDP-FPHKQK-----KE-RVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTP-
6	HHPRED-g	2oyr_A	0.996	0.956	7.914	threading_6	-KICLIDETGAGDGALSVLAARWGLEHDEDNL-ALVLTPEHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVR-LERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDP-FPHKQK-----KE-RVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV
7	SP3	2pkwa	0.921	0.968	5.612	threading_7	-QICLD-ETGATDGALSVLAARWGLEHDEDNP--ALVTPQHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRV-RLERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITPRPQVVYLDP-FPHRQKSALVKKERV-FQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIYAGTPL
8	SAM-T99	2pkwA	0.899	0.872	6.354	threading_8	------------------------ARWGLEHDNPALVTPQHLELRKRDEPKLGGIFVDFVGGAA-HRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRL-ERNPVVAALLDDGLTRGYADADIGGWLQERLQLIHASSLTALTDITPRPQVVYLDP-FPHRQKSALVKKE-RVFQSLVGPDLDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIYA----
9	MUSTER	2r6zB	0.379	0.908	2.636	threading_9	---TDILIDDTATEAVRTLIRAFPLSQPPEQGSYLLAEHDTVSLRLVGEKS--NVIVDFTSGAAQYRRTKGGG--ELIAKAVNHTAH--PTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPE-TQDTAARINLHFGNAAEQPALVQGKPDIVYLDPYP-------------AYFHRLVGEAQDEVVLLHTARQTAKKRVVVKRPRLGEHLAGQAPAYQYTGKSTRFDVYLPYGA
10	SPARKS	2pgxa	0.971	0.964	5.521	threading_10	-KICLIDETGTGDGALSVLAARWGLEHDED-NLALVLTPEHLELRKRDEPKLGGIFVDFVGGA-AHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVR-LERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPFP----HKQLVKKE-RVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV

Predicted Tertiary Structure


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TM-score=0.972 to 2pkwA TM-score=0.978 to native SCOP code=c.66.1.55	TM-score=0.969 to 2pkwA TM-score=0.971 to native SCOP code=c.66.1.55	TM-score=0.954 to 2pkwA TM-score=0.979 to native SCOP code=c.66.1.55	TM-score=0.942 to 2pkwA TM-score=0.968 to native SCOP code=c.66.1.55	TM-score=0.972 to 2pkwA TM-score=0.977 to native SCOP code=c.66.1.55

Experimental Structure

Download 2pgxA

SCOP code=c.66.1.55