Template-based Modeling Results for YICH_ECOLI


  Submitted Primary Sequence

>Length 569
MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
CCEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCEECCCCCCCEEEEEEEEEEECHHHCCCCEEEEEEEEECCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCEECCCCCCCCCEEEEEECHHCEECCEEHHHEEEEEEECCCEEEEECCCHHHHCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEEECCEEEECCCEEEEECCCCCCCCCCCCCEEEEEHHHCEECCEEEEEEEEEEEECCCCEEHHHHHHHHHCCEEEEEEEECCCCCEEEECCEEEECCEEECCCCHHHHHHHHCCHHHCCCEEEEEECCCEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCEEECCEEECCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCEEECCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
43120221220010002222122111112100300110033113220000001030211110001202024433322000100000000320232100000002202021233212121312100012110212223120102203000221112123211220101000210102401021000201033220101200020130200020111331212010010010103233102200211320210101201000020202200010010001102023222313302000102201111010110001010133101032010212211010201113332201012000100100033212200121012202202022010210000202230111000010202101001233100020101000230102300022010101023220101101021440101010101222433010101032020200221011302120101010102021313120210020202012244221211012010121323233338
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
1MUSTER2z64A0.1380.9071.040threading_1IEVVPNITYQ----CLSKVPDIPSSTKN---------DLSFNPLKILKSYSFS-NFSELQWLDLSRIETIEDKAWHGLHLSNLILTFSPGSFSGLTSLENLVAVETKLASLESFPIGQLTLKKLFIHSCKLPAYFSNLTLVHVDLSYTITVNDLQFRENPQVNLSLDMSLNPIFIQDQAFQ------GIKLHELTLRGNSSNIMKTCLQNL------AGLHVHRLILGE--FKDERNLEIFPSIMEGLCDVTIDEFRLTYTNDFSDDVKFHCLAMSLAGVSIKYLEDVPKHFKWSLSIIRCQLKQFSLTLTMNKGSISFKKVALPSLSYDLSRNALSFSGCCSYSDGTNSLRHLDLSFNGAIIMSA--------NFMGLEELQ--HLDFQHSTLKRVTEFSAFLLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF------ANTTNLTFLD--LSKCQLE---QISWGVFDTLRLLLNMSHNNLLFLDSSHYNQLYLS---TLDCSIETSKGILQHFPKSLA-FFNLTICEHQKFLQWVKKQFLVNVEMTCATPVE
2SPARKS1ziwa0.1570.9051.207threading_2----------------------------------VSHEVADCSHLKLT-QVPDDLPTNITVLNLTHNQL-RRLPAANFQLTSLDVKLEPELCQKLPMLKVLNLQHNELSLSDKTFAFCTNLTELHLMSNSIQKIKNNPKQKNITLDLSLSSTKLGTQVQLENLQELLLSNNKIQ--ALKSEELDIFANSSLKKLELSSNQ-------IKEFSPGCFHAIGRLFGLFLNNVQL----GPSLTEKLCLELANTSIRNLSLSNSQLSTKWTNLTMLDLSYNNLNVVGNDSFAWLPQL----EYFFLEYNNIQHLFSH-SLHGRYLNLKRSFTKQLPKIDDFSFQWLKCLEHLNMEDNDIPGLKYLLSNSFTSLLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRRLMLRRVALKNVDSSPSPFQPLRNLTSNNNIANINDDMLELDLQHNNLRLWKHANPGGPIYFLKGLSHLHLNLESNFKDLFELKIDLGLNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV
3PROSPECT22cn2A0.0740.9442.073threading_3VDNVVIGGGGGFPGIVFNETELLDHFQDEYSYY--------------GVESIATDPVDPNRVYIVAGYTNDWLPNGAILRSTEKTILPFKGGNPGRSGERLAIDPNSKVESFPNPGTIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNEVTWKAVPGQPKGLLPHHGVLASNGLYITYGDGKGQVWKFNTRTGEWIDITPIPSNAWWPDEYIFRSTDGTWKNIWERILHYEIDISAAPWLDWGTEKQLPEINPKLGWIGDIEIDPFNSDRYVTGATIYGCDNLTDWDRGGKVKIEVKATGIEECAVLDLVSLVSAVGDLVGFVHDDLKVGPKKSSGTGIDYAELVPNFALV--AKAVKKISFSYDGGRFQPPNEAPNSVGGGSVAVAADAKSVIWTPENASPA---VTTDNGNSWKVCTNLGGAV------VASDRVNGKKFYAFYNGKFYISTDGGLTFTDTKAPQLPK---SVNKIKAVPGKEGHVWLAAREGGLWRSTDGGYTFEKLSNVDTAHVVGFGKAAPGQDYA----IYITGKIDNVLGFFRSDDAGRINDDEHGYGAVAS
4PPA-I2pn5A10.1280.8891.476threading_4YKIT-----------IDGQRGFSF---------HKEAELVYLSKSISGLIQVDKPVFKPGTVNFRVIVLDTELKPPA-RVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAP---------------TPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKP---------VQGVAKVELYLDDDKELTVYGKGQVELRFDNFAMDADQQDVPVKVSFVEQYTNRTVVKQSQI---TVYRYAYRVELIKESPQFRPGLPFKCALQFTHH--DGTPAKGISGKVEVSDVRFETTTTSD--NDGLIKLELQPSEGTEQLSIHFNAVDGFFFY-------EDVNKVETVTDAYIKLELKSPIKFMVTCTERMTFFVYYVMSKGNIIDAGFMRPNKQPKYLLQLNATEKMIPRAK----ILIATVAGRTVVYDFADLAFQELRNNFDLSIDEQEIKPIELSMSGRPYDKALLLFNKNHDLEFDIFHSLGLFARTLDDILFDSQESWLWKNVSIGRSGSRKLIEVVPDGFSIDPVYIKKPIQ
5MUSTER3s94A0.1120.9101.031threading_5-----PLLLYDAAAVDFVFSHIYW---SDVSEEAIKQNV--VSGLL-SPDGLACDWSETNRIEVSNVLFWQEDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIINSEIYWP--------NGLTLDYEE-QKLYWADAKLNFI--HKSNLDGTNRQPFALTLFEDILYWTDW--THSILACNGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCG-SHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTDFTDIVLQLEDIRHVEGYIYWT--DDEVRAIRRSFIGSQFVVTAQIAHPDGIAVDWVARNLYWTDT---GTDRIEVTRLNGTMRKILISEDL------------EEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLG-WPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHITLLGDYVYWTDWQRRSIERVHKRS------AEREVIIDQLPDLMGLKATNVHRVIGSNPCAEENGGCSHLCLYRPQGLRCACPIGELISDMKTCIVP--
6SPARKS3a79b0.1260.8221.184threading_6-------------------------------------------ESMVDYSNRNLTHVPKDALSLSQNSI-SELRMPDISLRVLRLSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMA-SLRHLDLSFNDFDVLPVCKEFGNTFLGLSAAKFRQLDLLPVAHLSCILLDLVSYHIKGGETESLQI---PNTTVLHLVFHP----NSLFSVQVNMSVNA---LGHLQLSNIKLNDENRLMTFLSELTRGPTVTLQHIETTWKCSVFQFFWPRPVELNIYNLTIT-ERIDREEFTYS----ETALKSLMIEHVKNQVFLFSKEALYSVFA--------------EMNIKMLSISDTPFIH----------------MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRL----QTLILQRNGLKNFFKVALMTKNMS-SLETLDVSLNSLNSHAYDRTCSILVLN--LSSNMLTGS-VFRCLPPKVKVLDLHNMSIPKDVTHLQALQELNVASN-QLKSVPDGVFDRLTSLQYWLHDPWDCTCPGIRYLSEWINKGVV-RNSAGSVAPDS
7PROSPECT22pn5A10.1030.9021.912threading_7LSVLNVTKMVDVRRNMNRMINFNMPEDLTAGNYKITIDGQRGFSFHKEA-ELVYLSKSISGLIQVDKPVFKPGD--TVNFRVIVLDTELKPPARVKSVYTIRDPQRNVIRKWSTAKLYAGVFESDLQ-IAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQ---------GVAKVELYLDDDKLKLKKELTVYGLRFDNFAM---------DADQQDV-PVKVSFVEQYTNRTVVKQSQITVY----------RYAYRVELIKESPQFRPGLPFKCALQFTHHDGTVEVSDVRFETTDGLIKLELQPSEGTEQLSIHFNAVDGFFFY-------------------EDVNKVETVTDAYIKLELKSPIKVYYVMSKGNIIDAGFMRPNKQPKYLLQLNATEKMIPRAKI----LIATVAGRTVVYDFADLAFQELRNNFDLSIDEQEIKPIELSMSGRPGAYDIGQVFDGFHENEFDIFHSLGLFARTLDDILFDSQESWLWKNVSIGRSGSRKLIEVVPSIDPVYGIIKKPIQ
8PPA-I2z2oC0.1200.4411.240threading_8--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEFKLQELNLTNQDTGSDKGKVWIT--QHKANMISCINLITEYPLPTPDAKVMCLTIS-SDGEVWFTENAANKIGRITKKG-IIK--EYTLPNP------------DSAPYGITEGPNGDIWFTEMNGN--RIGRITDDGKIREYELPNKGSYPSFITLGSDNALWF--TENQNNAIGRITESGDITEFKIPTPANDDALWFVEI---IGNKIGRITTSGEITEFK-------IPTPNARPHAITAGAGID--------------LWFTEWGANKIGRLTSNNIIEEYPIQIKSAEP
9MUSTER3v4pA0.0860.9381.028threading_9LLYQGSVVLHSHGANRWLLVGTANWLANASVINPGAIYIGKNPGQTCEQLQLGSPCGKTCLEERDNLSRQPGENGSIVTCGHRWKNIFYIKNENKLPTGGCYGVPPDLRTELSKRIAPCYQDYVK--KFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYL-GYSVGAGHFRSQ--HTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNL-GDIDNDGF----------EDVAIGAPQEDDLQGAIYI--YNGRA-DGISSTFSQRIEGLQISKSLSM-----FGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHSVNRTKFDCVENGWPSVCIDL----TLCFSYKGKEVPGYIVLFYNMSLKAESPPRFYFSSNG------SDVITGSIQVSSANCRTHQAFMRKDVRDILTP-IQIEAAYHLGPHSTEEFPPLQPILQQKKEKDIMNFA
10SPARKS2z7xa0.1520.8651.181threading_10CKGSSGSLN-------SIPSGLTEAVK--------SLDLSNNRITYISNSDLQ-RCVNLQALVLTSNGINTEDSFSSLGLEHLDLNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHKLQILRVGNMDTFTKIQRKDFFLEELEIDLQSYEPKSLKSIQNVSHLILHMKQHIL----LLEIFVDVTSSVECLELRDTDLD----TFHFSELSTGETNSLIKKFTFRNVKI-TDESLFQVMKLLNQISGL--LELEFDDCTLNGVGIDPGKVELTIRRLHIPRFYLFYDLSRITVENSKVFLVPCLLSQHLKSLELSENLMVEEYLKNSACEDA-------WPSLQTLILRQNHLAS-------------LEKTGETLLTLNLTNIDISKNSFHSMPETCQWP-----EKMKYLNLSSTRIHSVTGCIPK------TLEILDVSNNNLN-LFSLNLPQLKELY--ISRNKLMTLPDASLLPMLL-VLKISRKSVPDGIFDRL--TSLQ-------KIWLHTN-----PWDCSCP-RIDYLSRWLNKNSQKEQGSAKCSGSGKPVRSII

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.591 to 1xecA
SCOP code=c.10.2.7
TM-score=0.932 to 1dabA
SCOP code=b.80.1.7
TM-score=0.587 to 1xecA
SCOP code=c.10.2.7
TM-score=0.714 to 2ebsB
SCOP code=b.69.13.1
TM-score=0.445 to 1e0oB
SCOP code=b.1.1.4