Template-based Modeling Results for YIGA_ECOLI


  Submitted Primary Sequence

>Length 235
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
5543233233222312130003003400200230030032020212241100012111220231233024102300210130210021002001100202103200210230032020200001012332322122311210102210220112212332110011212101100231421000000101232100000000312211231200100210020022002311344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
1MUSTER3e98A0.2380.7321.900threading_1----------------------------------------------------VSLVERQVRLLRERNIERHRLSQLDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRH-QVPYVSLILFSDSSVSVGRS------VSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGDRDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
2SPARKS3e98a0.2770.7363.994threading_2--------------------------------------------------VSLVERQVRLLRERNI--ERHRLSQLDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHFQVPYVSLILFSDSSVSVGRS------VSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGESDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
3PROSPECT23e98A0.2720.7362.314threading_3--------------------------------------------------VSLVERQVRLLRER--NIERHRLSQLDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHFQVPYVSLILFSDSSVSVGR------SVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGESDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
4PPA-I3e98A0.2430.7363.426threading_4----------------------------------------------------VSLVERQVRLLRERNIERHRLSQLDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEQVPYVSLILFSDSSVSVGRS------VSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGERDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
5HHPRED-l3e98_A0.2720.7369.752threading_5--------------------------------------------------VSLVERQVRLLRERNIE-RHRLSQL-DVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHFQVPYVSLILFSDSSVSVG------RSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGERDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
6HHPRED-g3e98_A0.2720.7368.558threading_6--------------------------------------------------VSLVERQVRLLRERNIE-RHRLSQL-DVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLREFQVPYVSLILFSDSSVSVG------RSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGERDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
7SP33e98a0.2720.7364.172threading_7--------------------------------------------------VSLVERQVRLLRERNI--ERHRLSQLDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLREFQVPYVSLILFSDSSVSVG------RSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGERDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
8SAM-T993e98A0.2720.7365.963threading_8--------------------------------------------------VSLVERQVRLLRERN--IERHRLSQLDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHFQVPYVSLILFS------DSSVSVGRSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGERDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRF----
9MUSTER3mmhA0.1650.6720.725threading_9-----------------------------------------------------------------------MHALHFSASDKAALYREVLPQIESVVAETDWVANLANTAAVLKEAGWFWVGFYLVDTRSDFQGPLACTRIPFGRGVCGQAWAKG---GTVVVGDVDAHP--DHIACSSLSRSEIVVPLFDGRCIGVLDADSEHLAQFDET-DALYLGELAKILEKRFEASRQAV
10SPARKS3mmha0.1670.6890.994threading_10-----------------------------------------------------------------------MHALHFSASDKAALYREVLPQIESVVADTDWVANLANTAAVLKEAGWFWVGFYLVDTRSDVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVV-VGDVDAHPDHIACSSLSRSEIVVPLFSDGCIGVLDADSEHLAQFDET-DALYLGELAKILEKRFEASRQAV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.583 to 1vhmB
SCOP code=d.110.2.1
TM-score=0.586 to 1vhmB
SCOP code=d.110.2.1
TM-score=0.591 to 1vhmB
SCOP code=d.110.2.1
TM-score=0.589 to 1vhmB
SCOP code=d.110.2.1
TM-score=0.591 to 1vhmB
SCOP code=d.110.2.1