Template-based Modeling Results for YIGM_ECOLI


  Submitted Primary Sequence

>Length 299
MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE
42110000000000010001000121010000001000000000000213202230001000000010000000001001102001000010000000000100023231200000000000000000102400210000000000010001001000220133230223100000000000000000011121320232212000000000000000100112000101100000010010000000000011221201000000000000000032101332232233444322235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE
1MUSTER3zuxA0.1270.9201.111threading_1I-FIGKTFSLWAALFAAAAFFAPDTF-KWAGPYIPWLLGIIMFGMGLTLKPSDFKHPKVVIIGVIAQFAIMPATAWCLSKLLEIAVGVILVGCCP-TASNVMTYLARGNVALSVAVTSVSTLTSPLLT-LAGEMQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTE--LTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAA-TGLPYDAQKALTIEVGMQSGLAAALAAAHFAAAP-VPGALFSVWHNISGSLLATYWAAKA----------------
2SPARKS3rcea0.1650.9300.774threading_2TTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWW---YPSSYSLNFAM-IGLFGLYTLVFIFYLAIALMIIALSMLAWQYKLALIVLLFAIFAFKEEKINFYMIWALIFISISILHLSGGAFMYETIMEVNTIDPEVFMQRISVLVFILSFIGFILL--CKDHKS------MLLALPMLALGFM---------ALRAGLRFTIYAVPVMALGFGYFLYAFKLSLRNKNILLILIAFFSISPALMHIYYYKSSTVFTSYKNKAQRE
3PROSPECT23kb9A0.0660.9601.566threading_3LPVIEAWPKLQETTRTWLLEK--RLMPADKVE-EYADGLCYTDLMAGYYLGAPDEVLQAIADYSAW-FFVWDDRHDRDIVHGRAGAWRRLRG----LLHTALDSPGDHLHHEDTLVAGFADSVR----RLYAFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEELELRRLTFAHWIWTDLLEPSSGCDAVRKHPAYRALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISLITHHSLTLEEAIGEVGKELSGAVRANVGNMRNWFSSVYWFHHESGRYMVDSWDDRSTPPYVNN
4PPA-I3zuxA0.1330.8531.498threading_4YIPWLLGIIMFGMGLTLFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEML-EIQAAGMLMSIV-----------KMVLLPIVLGLIVHKVLG-------SKTEK----LTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKTGLPYDAQKALTIEVGMQSGLAAALAAAHFAAAPVFSVWHNISGSLLATYWAAKA---------------------
5HHPRED-l3b5d_A0.1410.3311.278threading_5----------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFSE-----------------------------GF-TR------LW--PSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWGFFGQRLDLPA-IIGMMLICAGVLIINLL----S---------------
6HHPRED-g3b5d_A0.1410.3312.017threading_6----------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFSE-----------------------------GF-TR------LW--PSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWGFFGQRLDLPA-IIGMMLICAGVLIINLL----S---------------
7SP33zuxa0.1250.9400.490threading_7ISFIGKTFSLWAALFAAAAFFAPDTF-KWAGPYIPWLLGIIMFGMGLKPSDFDILFPKVVIIGVIAQFAIMPATAWCLSKLLNLAEIAVGVILVGCTASNVMTYLARGNVALSVAVTSVSTLTSPLLTMLAGMLEIQAAGMLMSIVKLLPIVLGLIVHKVLGSKTEK-LTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKTGLPYDAQKALTIEVGMQSGLAAALAAAHFAAAPVVPGALFSVWHNISGSLLATYW-----------AAKA-----
8SAM-T993b61A0.1630.3480.787threading_8-------------------------------------------------------------------LGGAILAEV----------------------------------------------IGTTLMKFSEG-----------------------FTRLWPS-----------------------------VGTIICYCASFWLLAQTLAYIPTGIAYAIW---------------SGVGIVLISLLSWGFFGQRLDLPAII-GMMLICAGVLIINLLSRSTPH--------------
9MUSTER3kb9A0.0910.9230.814threading_9WPKLQETTRTWLLEKRLMPADKV----EEYADGLCYTDLMAGYYL-----GAPDEVLQAIADYSAWFFVWDDRHDRDIVH-----RAGAWRRLRGLLHTALDSP-GDHLHHEDTLVAGFADSV-----RLYAFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPVEEYLELRRLTFAHWIWTDLLEPSSGCE--LPDKHPAYRRAALLSQEFAAWYNDLC-IAGDEVHNLGISLITHLAVERDALRFADELADGTAVRANVGNMRNWFSSVYWFHHESGRYMVDSWDDRSTPPYVNN
10SPARKS3gyya0.1270.7390.770threading_10--------------------------DNWYAHEEVQDVFAQAFKGYVEDNDHTVQVIMEQTQNGILQFVNQ------SPGFTGIPSAQIFFILMPTDMDTVLEFFDESKA-INEMFPKLYAEHGLELLKM---------------YPE--------GEMVVTADEPITSPEDFN----KKIPLLAETYKAFGTPTPLP-----------WGEVYGGLQ-----TGI--IDGNPIFWIESGWFTTAMMANQDFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLEKIKAASDEVTVTRLND

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.428 to 2q7nB
SCOP code=a.26.1.1
TM-score=0.393 to 1itfA
SCOP code=a.26.1.3
TM-score=0.463 to 2nr4A
SCOP code=b.45.1.4
TM-score=0.752 to 1hm7B
SCOP code=a.128.1.4
TM-score=0.425 to 1wu3I
SCOP code=a.26.1.3