Template-based Modeling Results for YIHM_ECOLI

Submitted Primary Sequence

>Length 326
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH
CCCHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH
54323203310331341100000000011132331102100200241412001001121321111312331021002103413010102121212200220010024010200101122323132002100300120130045120100011132220310010033031300100000010110231012003201300000001102113322121010011020201031002001301231100010013332321121121333222220112321312024331131113313330231022023002202220231245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH
1	MUSTER	3cqiA	0.150	0.776	1.614	threading_1	--------------KQIPLGIYEKAL-----PAGECWLERLQLAKTLGFDFVEMSVDETERLSRLDWSREQRLALVNAIVETGVRVPSAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKN------VPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAED---------------------------------------PAAEVAKARDWVKARMAKA------M---
2	SPARKS	2ou4a	0.131	0.798	2.734	threading_2	---------------MNKVGMFYTYWSTEWMV---DFPATAKRIAGLGFDLMEISLGE-----FHNLSDAKKRELKAVADDLGLTVMCCVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFDAKEAIAFADAVDSPACKVQLDTFHMNIEETSFRDAILACKGKMGHFHLGEANRL-----------PPGEGRLPWDEIFGALKEIGYDGTIVMEPFMRKGGSVSRAVGVWRDMSNG--------------------ATDEEMDERARRSLQFVRDKLA------------
3	PROSPECT2	2ou4A	0.135	0.798	2.632	threading_3	M---------------NKVGMFYTYW---STEWMVDFPATAKRIAGLGFDLMEIS-----LGEFHNLSDAKKRELKAVADDLGLTVMCSVRDAGTEYVKRLLDDCHLLGAPVFAGPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRNDAKEAIAFADAVDSPACKVQLDTFHMNIEETSFRDAILACKGKMGHFHLGEA-----------NRLPPGEGRLPWDEIFGALKEIGYDGTIVME---------------PFMRKGGSVSRAVGVWRDMSNGAT-----DEEMDERARRSLQFVRDKL------------A
4	PPA-I	3cqiA	0.142	0.779	1.935	threading_4	--------------KQIPLGIYEKAL-----PAGECWLERLQLAKTLGFDFVEMSVDETDRLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHLEIMRKAIQFAQDVGIRVIQLAGYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKN------VPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAED---------------------------------------PAAEVAKARDWVKARMAKAGM--------
5	HHPRED-l	2hk0_A	0.150	0.779	2.559	threading_5	-----------------KHGIYYSYWE---HEWSAKFGPYIEKVAKLGFDIIEVAAHH-----INEYSDAELATIRKSAKDNGIILTAGISSAGKAFFERTLSNVAKLDIHTIGGALHSPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRNTAAEGVAFVKDVGKNNVKV-LDTFH-NIEEDSFGDAIRTAGPLLGHFHTGESN-----------RRVPGKGR-PWHEIGLALRDINYTGAV-I-EPFVKTGGTIGSD----------IKVWRDLS----G-G----ADIAK-DEDARNALAFSRFVLGG-----------
6	HHPRED-g	3cqj_A	0.156	0.767	2.270	threading_6	---------------QIPLGIYEKAL-----PAGECWLERLQLAKTLGFDFVEMSVETDERLSRLDWSREQRLALVNAIVETGVRVDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMSKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTK------PGVFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSEDPAAEVAKARDWVKARM----A-----KAGM-----------------------------------------
7	SP3	3tvaa	0.183	0.773	2.978	threading_7	--------------PYWPIGVFT--------SVDAGLGVHLEVAQDLKVPTVQVHAPHPHTR-----TREHAQAFRAKCDAAGIQVTVIFTRASRVAEKEISDFASWVGCPAIGLHIGFPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQES-ADHLLEFIEDVNRPNLGINFDPANILYGTGNPIEALRKVARYVRSIHCKDALWAPERGKSWGQEVALGTGDVGE-AYLTTLWEIGYRGPLTIEREIPHD--------------------------------------PVQQKKDLASALELLTGLRKKI---ANC----
8	SAM-T99	2zdsB	0.141	0.764	3.129	threading_8	---------------PRNFTLFT------GQWADLPLEEVCRLARDFGYDGLELACWGDHFEDKALADPSYVDSRHQLLDKYGLKCWAISNHLDAAEIKDTARAAARLGVDTVIGFTGPAPEIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSYDYWTTHRALEAVGRPAFGLNFDPSHFVWQDLDPVGFLWDFRDRIYHVDCKEARKRLDGRRRGWDFVSAGHGDVPWEDVFR-LRSIDYQGP----VSVEWEDAG-------------------------------------DRLQGAPEALTRLKAF--------------
9	MUSTER	3tvaA	0.183	0.773	1.564	threading_9	--------------PYWPIGVFTS--------VDAGLGVHLEVAQDLKVPTVQVHAPHPHTR-----TREHAQAFRAKCDAAGIQVTVGESYADRVAEKEISDFASWVGCPAIGLHIGFPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQE-SADHLLEFIEDVNRPNLGINFDPANILYGTGNPIEALRKVARYVRSIHCKDALWAPERGKSWGQEVALGTGDVG-EAYLTTLWEIGYRGPLTIEREIPHD--------------------------------------PVQQKKDLASALELLTGLRKKIANC-------
10	SPARKS	3tvaa	0.175	0.773	2.730	threading_10	--------------PYWPIGVFT--------SVDAGLGVHLEVAQDLKVPTVQVHAPHPHTR-----TREHAQAFRAKCDAAGIQVTVIFTRASRVAEKEISDFASWVGCPAIGLHIGFPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQE-SADHLLEFIEDVNRPNLGINFDPANILYGTGNPIEALRKVARYVRSIHCKDALWAPERGKSWGQEVALGTGDVG-EAYLTTLWEIGYRGPLTIEREIPHD--------------------------------------PVQQKKDLASALELLTGLRKKIANC-------

Predicted Tertiary Structure


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TM-score=0.715 to 1i60A SCOP code=c.1.15.4	TM-score=0.729 to 2q02A SCOP code=c.1.15.4	TM-score=0.711 to 1k77A SCOP code=c.1.15.5	TM-score=0.705 to 1i60A SCOP code=c.1.15.4	TM-score=0.720 to 2q02A SCOP code=c.1.15.4