Template-based Modeling Results for YIJO_ECOLI


  Submitted Primary Sequence

>Length 283
MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE
CCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEECCCEEEEEEEEEEEEECCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE
5522011002101312221200000222111121101010010000020101122110202301000010112112323220100000002221101112121310220022101310220021012002202222112200210000001102210123232223132002001200141031202131004102001200020013104100220011010210120142231303200220112102100200141242012201321233234332334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE
1MUSTER3gbgA0.1240.8872.328threading_1--------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKL-LVSYEINSSSIILLKKNSIQRFLSDENINVSVITISDSFIRSLKSYILGNKDLLLWN-----CEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---------
2SPARKS3gbga0.1230.8943.551threading_2---------------KKSFQNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLILVSYEINSSSIILLKKNSIQRFSSLSDENINVSVI---TISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---------
3PROSPECT23gbgA0.1190.8903.368threading_3--------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLCLVSYEINSSSIILLKKNSIQRSLSDENINVSVITISDSFIRSLKSYILGNKDLLLWN-----CEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEK--KYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFML---------TGV
4PPA-I3gbgA0.1230.8902.937threading_4--------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLILVSYEINSSSIILLKKNSIQRFLSDENINVSVITISDSFIRSLKSYILGNKDLLLWNCE-----HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---------
5HHPRED-l3gbg_A0.1210.8734.023threading_5---------------KKSFQTVYRMSKFDTYIFNNLYINDYKMFWIDSGIALIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILG---------LLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNS--IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---------
6HHPRED-g3gbg_A0.1090.8733.696threading_6-------------KKSFQTNVYRMSKFD-TYIFNNLYINDYKMFWIDSGIALIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILG----------LLNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSI--FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---------
7SP33gbga0.1260.8943.688threading_7--------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDVSYEINSSSIILLKKNSIQRFSLSDENINVSVIT----ISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDL--DAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV---------
8SAM-T992k9sA0.3400.3643.077threading_8----------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRA--------------
9MUSTER2k9sA0.3300.3751.359threading_9----------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE-----------
10SPARKS3ooua0.3040.3602.285threading_10-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SPIIQNVLSYITEHFSE-GSLKTLGNDFHINAVYLGQLFQKE-GEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDA-YFYRQFKKHTGETPNRYRKIHQ-----------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.488 to 1xjaC
SCOP code=b.82.4.1
TM-score=0.482 to 1d5yA
SCOP code=a.4.1.8
TM-score=0.483 to 1xjaC
SCOP code=b.82.4.1
TM-score=0.496 to 1xjaC
SCOP code=b.82.4.1
TM-score=0.494 to 1xjaC
SCOP code=b.82.4.1