Template-based Modeling Results for YJBG_ECOLI


  Submitted Primary Sequence

>Length 245
MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
CCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCEEHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
43120010000000011010102020113322211212223102200222311311120010012211211232122012201321332223102002102210331322010202011200211332212032211010032322010001122102020231230010022023122033220000102130220200111333231220000000012221242032012100200133135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
1MUSTER3p42A0.4190.9062.789threading_1---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRRLWWPGALLTD-SAAKAKALKDYQHVAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
2SPARKS3p42a0.4320.9065.068threading_2---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTDSAAKAKALKDYQH-VAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
3PROSPECT23p42A0.4280.9063.605threading_3---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQRDRLWWPGALLTDSAAKAKALKDYQH-VAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPH
4PPA-I3p42A0.4190.9065.024threading_4---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTD-SAAKAKALKDYQHVAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
5HHPRED-l3p42_A0.4390.90210.194threading_5--------------------QG-VTIYLPGEQQTLSVGPVENVAQLVTQPQLRRLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVP-
6HHPRED-g3p42_A0.4370.9067.129threading_6--------------------QG-VTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
7SP33p42a0.4320.9064.753threading_7---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTDSAAKAKALKDYQHVA-QLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
8SAM-T993p42A0.4190.8865.496threading_8-------------------------IYLPGEQQTLSVGENVAQLVTQPQLRD-RLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
9MUSTER2j58A0.1420.9800.850threading_9LVNVYPPGLIDQLRPEPVIARSNPQLDNLLKSYEYRIGVGDVLPELTTPAGQYRSASDTGNWVNSDAGKTVSQVRQDITSRLTTIAAFRSQTNIPLTVDAINAAGGLAADADTKISLY-ALQKGDLTQNHLLYHGDILFIPSNDDLKVFVGEVGKQSTLKD-RSGTLAEALGNAEGIQESDATGIFVVRQLGKIADIDASAVLGTEFQLQPYDIVYVTTAPLV---RWNRVISQLVPTISGVHDT
10SPARKS2j58a0.1370.9551.181threading_10LVNVYPPGLIDQLRPEPVIARSNPQLDNLLKSYEYRIGVGDVLVTVWDHPELTTPAGQYRSASDTGNWKTVSQVRQDITSRLTTYIESPQVDNIPLTVDAINAAGGLAADGKDTKISLYALQKGDLTQNHLLYHGDILFIPSNDDLKVFVGEVGKQSTLKD-RSGTLAEALGNAEGISESDATGIFVVRRTGKIADIDASAVLGTEFQLQPYDIVYVTTA----------PLVRWNRVISQLVPT

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.436 to 2qsbA
SCOP code=a.29.14.1
TM-score=0.438 to 2qsbA
SCOP code=a.29.14.1
TM-score=0.436 to 2qsbA
SCOP code=a.29.14.1
TM-score=0.438 to 2qsbA
SCOP code=a.29.14.1
TM-score=0.439 to 2qsbA
SCOP code=a.29.14.1