Template-based Modeling Results for YJEM_ECOLI


  Submitted Primary Sequence

>Length 500
MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGMTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHLSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNPQWAVE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGMTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHLSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNPQWAVE
CCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEEEHHHHHHHHHHCCCHHEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGMTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHLSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNPQWAVE
55432220010000000000000011001001310110000000000011000000001001113434100000013011220000000000000001001000100000000010131133121111201100000000000000001121133013002100201102111111101022113222112211112121021201000000000000000002000000341332343013000000000000100000001001213201331211000000000200020002002112200100010000000001000000000000100010003202321013100322322011100001000000001011101210110021001011000000000000000002133313220100212200000000000000000001001100221102000110001000000000002100221342232225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGMTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHLSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNPQWAVE
1MUSTER3l1lA0.1700.8362.613threading_1----AHKVGLIPVTLMVSGAIMGSGLLPANLASTGGIAIYGWLVTIIGALG-LSMVYAKMSFLDPSP-GGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYL-----------SYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG-----------------WFWFRGETYMA-AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASP-----FGDAARMAL-----------------GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSIS--PNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHGKARPAYL---------------AVTTIAFLYCIW-AVVGSG---AKEVMWS--FVTLMVITAMYALNYNRLHKNP--PLD
2SPARKS3ob6a0.1620.8505.252threading_2--ADAHKVGLIPVTLMVSGNIMGVFLLPANLASTGGIAIYGWLVTIIGALG-LSMVYAKMSFLDPSP-GGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFF-----------PILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFW--------FRGETYMAAWNVSGLGTFGAIQSLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS---------PFGDAARM-------------ALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQL--------SSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHGKARPAYLA-------------VTTIAFLYCIWAVV---GSG---AKEVMWS--FVTLMVITAMYALNYNRLHKNPY-PLD
3PROSPECT23gi8C0.1370.8642.222threading_3MELKNKKLSLWEAVSMAVGVMIGFSIFGVGAKIAGRNLPETFILSGIYALL-VAYSYTKLGAKIVSN-AGPIAFIHKAIGDNIITGALS--ILLWMSYVISIALFAKGFAGYFLPLINAPINT--------FNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIF---------AGLITIHPSYVIPDLAPSAVS-GMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN----ALAVAAKPFL-----------------GNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFK-STEGLYITSALGVLFALLFN---------MEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIF-------------SFIVVLGVFLLLLYYQWITN--RFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS
4PPA-I3l1lA0.1720.8385.600threading_4----AHKVGLIPVTLMVSGAIMGVFLLPANLASTGGIAIYGWLVTIIGALG-LSMVYAKMSFLDPSP-GGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK-----------DPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG-----------------WFWFRGETYMA-AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASP-----FGDAARMAL-----------------GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSIS--PNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHHFGKARPAYL---------------AVTTIAFLYCIW-AVVGSG---AKEVMWS--FVTLMVITAMYALNYNRLHKNP-YPLD
5HHPRED-l3gia_A0.1420.8487.828threading_5--LKNKKLSLWEAVSMAVGVMIGASIFGVGAKIAGRNLPETFILSG-IYALLVAYSYTKLGAKIVSN-AGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLI-NAP----------INTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLIT--IHPS------YVIPDLAPS--AVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKAS----ENALAVAAKPF-----------------LGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYIT-SALGVLFALLF---------NMEGVASITSAVFMVIYLFVILSHYILIDEV----GG-----R-------KEIVIIVVLGVFLLLLYYQWIT-NRFVFYGIIA-TFIGVLIFEIIYRKVTKRTFSNN-MYV-
6HHPRED-g3gia_A0.1280.8467.177threading_6--LKNKKLSLWEAVSMAVGVMIGASIFGVGAKIAGRNLPETFILSG-IYALLVAYSYTKLGAKIVSN-AGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLP-LINAP----------INTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLIT--IHPSYV-IP-----DLAP--SAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKAS----ENALAVAAKP----F-------------LGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYIT-SALGVLFALLF---------NMEGVASITSAVFMVIYLFVILSHYILIDEVGG----------------RKEIVIFSFIVVLGVFLYYQWI-TNRFVFYGI----IATFIGVLIFEIIYRKVTKRTFSNNMY
7SP33ob6a0.1770.8484.717threading_7--ADAHKVGLIPVTLMVSGNIMGFL-LPANLASTGGIAIYGWLVTIIGALG-LSMVYAKMSFLDPSP-GGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFF-----------PILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLA-LIPIVGIAVFGWFWFRGE-------TYMAAWNVSGLGTFGAIQSLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASP-----FGDAARMA-----------------LGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSIS--------PGLVSSVSVIFTLVPYLYTCAALLLLGHGFGKARPAYL---------------AVTTIAFLYCIW-AVVGSG---AKEVMWS--FVTLMVITAMYALNYNRLHKNP-YPLD
8SAM-T993l1lA0.1500.8388.255threading_8----AHKVGLIPVTLMVSGAIMGSGVFPANLASTGGIAIYGWLVTIIGALG-LSMVYAKMSFLDP-SPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFF-----------PILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWF-WFRGETYMA-----------------AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVS-----ASPF-----------------GDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQL--SSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHH----------FGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMITAMYALNYNRLHKNPYPLDA------------
9MUSTER3gi9C0.1420.8602.543threading_9MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAGRNLPETFILSGIYALL-VAYSYTKLGAKIVSN-AGPIAFIHKAIGDN--IITGALSILLWMSYVI-SIALFAKGFAGYF--------LPLIAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLI--------TIHPSYVIPDLAPS--AVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN---------------------ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFK-STEGLYITSALGVLFALLFN---------MEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFS-------------FIVVLGVFLLLLYYQWITN--RFVFYGIIATFIGVLIFEIIYRKVTKRFSNNMY-SLE
10SPARKS3l1la0.1690.8385.187threading_10----AHKVGLIPVTLMVSGAIMGVFLLPANLASTGGIAIYGWLVTIIGALG-LSMVYAKMSFLDPSP-GGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYL-----------SYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAV-----------------FGWFWFRGETYMA-AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASP-----FGDAARMAL-----------------GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQL--SSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHGKARPAYL---------------AVTTIAFLYCIWAVV-GSG---AKEVMWS--FVTLMVITAMYALNYNRLHKNPY-PLD

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.667 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.677 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.681 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.689 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.661 to 2q6hA
SCOP code=f.54.1.1