Template-based Modeling Results for YJIK_ECOLI

Submitted Primary Sequence

>Length 286
MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEEECHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
5531221022000000000000000011221223032111133010002033023123201101111321100001242110010113121012010321311210100231100002233220100101342412102202021332322210200011443200000223322100202112223313123232133311232000010133421000012314100101321211000001321321333122020000132110000022110020223337
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH
1	MUSTER	3qqzA	0.979	0.839	2.479	threading_1	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVET-TNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-SLTKGSRGLSHNIKQAEGVAD-ASGNIYIVSEPNRFYRFTP----
2	SPARKS	3qqza	0.983	0.839	4.632	threading_2	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG-ESLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
3	PROSPECT2	3qqzA	0.979	0.839	3.164	threading_3	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI-GESLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
4	PPA-I	3qqzA	0.979	0.839	3.956	threading_4	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVET-TNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-SLTKGSRGLSHNIKQAEGVAD-ASGNIYIVSEPNRFYRFTP----
5	HHPRED-l	3qqz_A	0.988	0.839	2.362	threading_5	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-SLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
6	HHPRED-g	1q7f_A	0.118	0.773	2.103	threading_6	--------------------------------------IKRQRMCKFGEFGVMEGQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGRFKFQFGECQLLYPNRVAVVRNGDIIVTRSPTHQIQIYNQY----GQFVRKFGA-----TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-----KFGC----SKHLEFPNGVVVNDK-QEIFISDNRAHCVKVFNYEGQYLRQI---GG----EGITNYPIGVGINSNGEILIADNHNNLTIFTQDGQL
7	SP3	3qqza	0.983	0.839	4.455	threading_7	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG-ESLTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
8	SAM-T99	3qqzA	0.983	0.839	9.078	threading_8	---------------------------------------SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVE-TTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGES-LTKGSRGLSHNIKQAEGVA-DASGNIYIVSEPNRFYRFTP----
9	MUSTER	1q7fB	0.117	0.899	1.709	threading_9	FGEFGVMEGQFTEP----SGVAVNAIIVADTNNHRIQIFDKEGFKFQFECGKRDSQLLYPNRVAVVRNSGDIIVTERPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFD----QNGNVLHKFGCS----KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG---------QYLRQIGGEGITNYPIGVGINSN-GEILIADNHNNNLTIFTQDGQLISALES-------KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA
10	SPARKS	1q7fa	0.121	0.899	2.185	threading_10	FGEFGVMEGQFTEP----SGVAVNAIIVADTNNHRIQIFDKEGRFKFQECGKRDSQLLYPNRVAVVRNSGDIIVTERPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIF----DQNGNVLHKFGCS----KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY---------LRQIGGEGITNYPIGVGINSN-GEILIADHNNFNLTIFTQDGQLISALES-------KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.619 to 1uv4A SCOP code=b.67.2.1	TM-score=0.619 to 1uv4A SCOP code=b.67.2.1	TM-score=0.637 to 1rwiA SCOP code=b.68.9.1	TM-score=0.638 to 1q7fB SCOP code=b.68.9.1	TM-score=0.619 to 1uv4A SCOP code=b.67.2.1