Template-based Modeling Results for YJIM_ECOLI


  Submitted Primary Sequence

>Length 383
MSLVTDLPAIFDQFSEARQTGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLKMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLVTDLPAIFDQFSEARQTGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLKMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLVTDLPAIFDQFSEARQTGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLKMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML
45323202200220120132002101313442220000001100200010010000000112321121025200220010010000002233022131010000211020122002002312200001011223332012102210230131014202231233102300111221130011003003322120201100100000102122310121022002202312342342333110000001011203200200231101000111011121133212322100110011002110102021320030012003203020000000200201101011012103333400000010122233221012102101221
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSLVTDLPAIFDQFSEARQTGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLKMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML
1MUSTER3o3mB0.1990.9562.825threading_1------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTE-LDLAKQYFPAFACSIMQSCLEYGLKGAYDELSG---VIIPGMCDTLICLGQNWKSAIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSG-FFMRKEEHTELVKDLIAKLNAM---PEEVCSGKKVLLTGILADS--KDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIESLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIEDS-GIPTLYVEIDQQTQNNEQARTRIQTFAEMM
2SPARKS3o3mb0.2020.9567.121threading_2------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTE-LDLAKQYFPAFACSIMQSCLEYGLKGAYDELSG---VIIPGMCDTLICLGQNWKSAVPYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIK-SGFFMRKEEHTELVKDLIAKLNA---MPEEVCSGKKVLLTGILA--DSKDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIESLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIE-DSGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
3PROSPECT23o3mB0.2020.9564.220threading_3M------EAILSKMKEVVENPNAAVKKYSETGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTE-LDLAKQYFPAFACSIMQSCLEYGLKGAYDELSG---VIIPGMCDTLICLGQNWKSHIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSG-FFMRKEEHTELVKDLIAKLNA---MPEEVCSGKKVLLTGILADS--KDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIESLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDI-EDSGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
4PPA-I3o3mB0.2020.9564.398threading_4------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTE-LDLAKQYFPAFACSIMQSCLEYGLKGAYDELSG---VIIPGMCDTLICLGQNWKSAVPYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSG-FFMRKEEHTELVKDLIAKLNAM---PEEVCSGKKVLLTGILADS--KDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIESLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIED-SGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
5HHPRED-l3o3m_B0.2110.9539.316threading_5------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWGG-QTELDLAKQYFPAFACSIMQSCLEYGLKGAYD---ELSGVIIPGMCDTLICLGQNWKSHIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFF-MRKEEHTELVKDLIAKLNAMPEEV---CSGKKVLLTGILADSK--DILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIGCSLADPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDI-EDSGIPTLYVEIDQQTQNNEQARTRIQTFAEM-
6HHPRED-g3o3m_B0.2080.9567.411threading_6------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWGG-QTELDLAKQYFPAFACSIMQSCLEYGLKGAYD---ELSGVIIPGMCDTLICLGQNWKSAIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFF-MRKEEHTELVKDLIAKLNAMPEEV---CSGKKVLLTGILADS--KDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNEGCSLAYPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDI-EDSGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
7SP33o3mb0.2130.9567.601threading_7------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTE-LDLAKQYFPAFACSIMQSCLEYGLKGAYDELSG---VIIPGMCDTLICLGQNWKSAIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIK-SGFFMRKEEHTELVKDLIAKLNAMPEEVC---SGKKVLLTGILA--DSKDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIGCSLADPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIE-DSGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
8SAM-T993o3mB0.2050.9567.494threading_8------MEAILSKMKEVVENPNAAVKKYKSEGKKAIGCFPVYCPEEIIHAAGMLPVGIWG-GQTELDLAKQYFPAFACSIMQSCLEYGLKGA---YDELSGVIIPGMCDTLICLGQNWKSHIKYISLVHPQNRKLEAGVKYLISEYKGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFFM-RKEEHTELVKDLIAKLNAM---PEEVCSGKKVLLTGILADSK--DILDILEDNNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIGCSLYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDI-EDSGIPTLYVEIDQQTQNNEQARTRIQTFAEMM
9MUSTER3o3mA0.1630.9612.513threading_9-------KEARVVINDLLAEQYANAFKAKEEGRP-VGWSTSVFPQELAEVFDLNVLYPEKGSLELCEIAESKYSIDLCAYARTNFGLLENGGCEALDMPFLLCCNNICNQVIKWYENISREIPLIMIDTTFNNETQSRIDYIKAQFEEAIKQLEIISGKKFDPKKFEEVMKISAENGRLWKYSMSLPASSPSPMNGFDLFTYMAVIVCARGKKETTEAFKLLIEELEDNMKTGKSSEEKYRIMMEGIPCWPYIGYKMKTLAKFGVNMTGSVYPHAW-----ALQYEVNDLDGMAVAYSTMFNNV--NLDRMTKYRVDSLVEGKCDGAFYHMNRSCKLMSLIQYEMQRRAAEETGLPYAGFDGDPRAFTNAQFETRIQGLVEVM
10SPARKS3o3ma0.1630.9616.145threading_10-------KEARVVINDLLAEQYANAFKAKEEGRP-VGWSTSVFPQELAEVFDLNVLYPKKGSLELCEIAESGYSIDLCAYARTNFGLLENGGCEALDMPFLLCCNNICNQVIKWYENISRDIPLIMIDTTFNNETQSRIDYIKAQFEEAIKQLEIISGKKFDPKKFEEVMKISAENGRLWKYSMSLPASSPSPMNGFDLFTYMAVIVCARGKKETTEAFKLLIEELEDNMKTGKSSEEKYRIMMEGIPCWPYIGYKMKTLAKFGVNMTGSVYPHAW-----ALQYEVNDLDGMAVAYSTMFNNV--NLDRMTKYRVDSLVEGKCDGAFYHMNRSCKLMSLIQYEMQRRAAEETGLPYAGFDGDQADPTNAQFETRIQGLVEVM

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.474 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.474 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.474 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.475 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.476 to 2r2vA
SCOP code=h.1.3.1