Template-based Modeling Results for YJIN_ECOLI


  Submitted Primary Sequence

>Length 426
MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
543212122112001000000000000010022100000010000000000000000000002402120103111002321320032002002320021310111033121011002101223103200210020011003212322023002300220034131120012002101423322200110021013103333113100210121022112110310012100220021002002200221242321301200120022003303313301210210121133232013002300220131022113232230122013002200310221320121011002200220022002101200120042122310021012211320100101000000000000000010011021243
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
1PROSPECT21b3ua0.1080.9952.154threading_1AARLNSIKKLSTIALALRTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSVKAELRQYFRNLCSDDT--PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDEPEVRLNIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSNVAKSLQKIGPILDLSLA
2PPA-I1b3uA0.1080.9951.062threading_2IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYSLATVEERDKAVESLRAISHE--HSPSDLEAHFVPDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVATELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA
3HHPRED-g2qk2_A0.1390.4721.056threading_3----------------------------------------------------------------------------------------------------------------------------------------GSH-DLLDPVDILSK-PKDFYDKLEEKKWTLRSLEVLEKLLTDGEYGAL----VSALKKVITDSNLVA-AGKCLALLAKGLAKRFS--------------NYASACVPSLLEKFKEKKPNVVTALREAIDAIYESLSNNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKL-GDDPLK-AKIKECQEKA-------------------------------------------EIKIKVA-----------------------
4PROSPECT21jdha0.0830.9882.012threading_4IRAIPELTKLNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQAGTLHNLSHHREGLLAIFKS--GGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN--VKFLAITTDCLQILAYGNQESKLIILGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGMQALPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGINVVTCAAGILSNLTCNNYKNKMMVCQEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRL-HYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRERLVQLLVRAHQDMEEIVEGCTGALHILARDVHNRIVIRGLIPLFVQLLYSPIENIQRVAAGVLCELKEAAEAIEAEGA
5PROSPECT21ejlI0.1070.9181.959threading_5GTVNWSVEDIVKGLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLG------------------------KTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPH--AHISEQAVWALGNIA-GDGSAFRDLVIKDPLLALLAVPDLSTLACGYLRNLTWPAPPLDAVEQILPTLVRLLHHNEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD----KIEALQRHENESVYKASLNLIEKYFS----
6PROSPECT21ee4a0.0940.9231.954threading_6QELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG------------VVPRLVEFMR-----------ENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGS--VEVKEQAIWALGNVA-GDSTDYRDYVLQCNAMEPILNSNKPSLIRTATWTLSNPQPDWSVVSQALPTLAKLIYSMETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVETLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDNLIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSPLCDLLEIADNRIIEVTLDALENILKM--GEADKEARGLNINENADFIEKAG-GMEKIFNCIYEKAYKIIETY----F
7PROSPECT21w63A0.1070.9911.881threading_7MPQAEEREMIQKECAAIRRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTQFVQGLALCTLGCMGSSEMCRDGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYDPFLQVRILRLLRILGRNDDSSEAMNDILAQVATNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSGIFLAAEKYAPSKRWHIDTIVPNLIQLITNSVEMHAYTVQRLYKAILGPLVQVAAWCIGEYGDLLVSGQEDEVLDILESVLISNMS----TSVTRGYALTAIMKLSVEYNALFKKYDH
8MUSTER1b3uA0.1150.9770.963threading_8QLRLNSIKKLSTIALALGVERTRSELLPFLTEDEVLLALAEQLGTFTLVGGPEYVHCLLPPLESL---ATVEETVV----RDKAVESLRAISHE--HSPSDLEAHFVPLAVKAELRQYFRNLCSTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKRVRYMVADKFTELQKAVGPEITKTDVKEFCENCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDEDCVNEVIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMT-NVLSEVCGQDITTKHMLPTVLRMAGD
9SPARKS2xwub0.1010.9510.869threading_9LDTVENVEKALHQLYIENKNLAQKWLMQAQVSPQAWHFSWQKVPEIQYFGASALHIKISRYWSDIP-----------TDQYESLKAQLFTQITRFASGSKIVLTRLCVPCAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAV-ECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFASELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVL-GLQEQLRQAVQNGDMETSHGIC--RIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPNETTSSLTLTFWYTLQDDILSEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSEKEQFRIYRVDISDTLMYVEMLGA------ELLSNLYDKLGRLLTSYSW
10PROSPECT21gw5a0.1010.9271.847threading_10KSKEAEIKRINKELANISKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFIS------------VLVNSNSELIRLINNAIKNDLASRNPTFMNVGSREMAEEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLGVVTAATSLITTLAQKNTSVSLAVSRLSRIVTSASAPWLSVKLLRLLQCYPPPEAVRGRLTECLETILNKQHSNAKNAVLFEAISLIIHPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKRDVSVRQRAVDLAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDT---ILNLIRIAGDYVSEEVWYRVIQIVINRDQGYAAKTVFEALQAP--------ACHENLVKVGGYILGEF--------G

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.852 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.673 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.796 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.474 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.842 to 2ooeA
SCOP code=a.118.8.7