Template-based Modeling Results for YJJJ_ECOLI

Submitted Primary Sequence

>Length 443
MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDTGKAHKFADIRLCWPQGSCLVTGADGDEQWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTDDIRLWQEEDVLYALTVFNGEYTGGWLVGEGNYQRWITAQHPAEIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTYYAQTPSGNKHVLVKFTVPQQTAVSQRWGDLLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPQAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMVYAPNSAGMLRDAAIEVKFDLNVSKSAWLTAIPLAQQFWQTVARDPRISEAFRHIAQEMPEKIRQIEEKVARMGG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDTGKAHKFADIRLCWPQGSCLVTGADGDEQWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTDDIRLWQEEDVLYALTVFNGEYTGGWLVGEGNYQRWITAQHPAEIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTYYAQTPSGNKHVLVKFTVPQQTAVSQRWGDLLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPQAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMVYAPNSAGMLRDAAIEVKFDLNVSKSAWLTAIPLAQQFWQTVARDPRISEAFRHIAQEMPEKIRQIEEKVARMGG
CCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCEEEHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDTGKAHKFADIRLCWPQGSCLVTGADGDEQWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTDDIRLWQEEDVLYALTVFNGEYTGGWLVGEGNYQRWITAQHPAEIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTYYAQTPSGNKHVLVKFTVPQQTAVSQRWGDLLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPQAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMVYAPNSAGMLRDAAIEVKFDLNVSKSAWLTAIPLAQQFWQTVARDPRISEAFRHIAQEMPEKIRQIEEKVARMGG
43311211321222032024313122110120032332102103141011011222212330100101321302311201101131000111231233113100100110102101010001102321322332321212000100111213111002113122332122322231213210220221011122121221011131210000021222221000201233322123210100000000020032020300201001223320000011011423311000000200112113221112200210032222233101200000000100100110010000001332010000000011110131212132111203132222220021012002200210142330132022003200310330232024225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDTGKAHKFADIRLCWPQGSCLVTGADGDEQWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTDDIRLWQEEDVLYALTVFNGEYTGGWLVGEGNYQRWITAQHPAEIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTYYAQTPSGNKHVLVKFTVPQQTAVSQRWGDLLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPQAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMVYAPNSAGMLRDAAIEVKFDLNVSKSAWLTAIPLAQQFWQTVARDPRISEAFRHIAQEMPEKIRQIEEKVARMGG
1	MUSTER	3fbrA	0.143	0.867	1.793	threading_1	--------------------------PKL--VTWMNN--QRVG-----ELTKLANGAH-----TFKYAPEWLASRYARPL-------SLSLPLQRGNITSDAVFNFFDNLLPDSPIVRDRIVKRYH----------AKSRQPFDLLSEIGRDSVGAVTLIPEDETVTHPIMAWEKLTEARLEEVLTAYKADIPLENDFRISVAGAQEKTALLRIGNDTPTTHIIKLPIGEIPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGN-VRALAVERFDRRWNAERLPQEDMCQTFGLPESDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQWLIGATQGHAKNFSVFIAGGSYRLTPFYDIISAFPVLGGTGIHISD-LKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPVQMHEILSDFARMIPAALDNVKTLPT
2	SPARKS	2wiua	0.151	0.867	4.897	threading_2	-------------------------------------PKLVTWMNNQRVGELTKLANGAHT---FKYAPEWLASRYARPL-------SLSLPLQRGNITSDAVFNFFDNLLPDS---PIVRDRIVKRYH-------AKSRQPFDLLSEIGRDSVGAVTLIPEDEHPIMAWEKLTEARLEEVLTAYDIPLGMIREENDFRISVAGAQEKTALLRIGNITPTTHIIKLPIGRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGN-VRALAVERFDRRWNAERLPQEDMCQTFGLPSSDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQWLIGATDGHAKNFSVFIAGGSYRLTPFYDIISAFPVLGGTG-IHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPVQMHEILSDFARMIPAALDNVKSLPT
3	PROSPECT2	3dntA	0.134	0.828	2.636	threading_3	------------------------------------PKLVTWNNQRVGELTKLANGAH-----TFKYAPEWLA---------SRYARPLSLSLPLQRGNITSVFNFFDNLLPDSPIVRDRIVKRYHAKSRQ----------PFDLLSEIGRDSVGAVTLIPIAWEK---------LTEARLEEVLTAYKADIPLGNDFRISVAGAQEKTALLRI----GNDWCIPKGITPTTHIIKLPIQSVDNEYYCLLLAKELGLNVPDAEIIKAGN-VRALAVERFDRRWNAERTVLLRLPQEDCQTFGLPSSVKYESDRIAFLGSSEALKDRYDFKFQVFQWLIGATQGHAKNFSVFIQGGSYRLTPFYDIISAFPVLGGTGIHISDLKLAGLNASKGK--KTAIDKIYPRHFLATAKVLRFPEVQHEILSDFARIPAALDNVKTSLPT
4	PPA-I	3fbrA	0.146	0.867	2.517	threading_4	-----------------------------------PKLVTWMNNQRVGELTKLANGAH-----TFKYAPEWLASRYARPL-------SLSLPLQRGNITSDAVFNFFDNLLPDSPIVRDRIVKRYHAKSR----------QPFDLLSEIGRDSVGAVTLIPEDETVTHPIMAWEKLTEARLEEVLTAYKADIREENDFRISVAGAQEKTALLRIGNITPTTHIIKLPIGRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGN-VRALAVERFDRRWNAERLPQEDMCQTFGLPESDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQWLIGATQGHAKNFSVFIAGGSYRLTPFYDIISAFPVLGGTGIHISD-LKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPVQMHEILSDFARMIPAALDNVKTSLP
5	HHPRED-l	3dnu_A	0.142	0.781	7.897	threading_5	-----------------------------P-----KLVTW-------------------NNQRVGELTKLNGAHTFKYAWLASRYARPLSLSLPLQRGNITAVFNFFDNLLPDSPVRDRIVK----RYHAKS-------RQPFDLLSEIGRDSVGAVTLIPEDET------AWEKLTEARLEEVLTAYKAD------FRISVAGAQEKTALLRIKGITPTTHIIKLPI---------LSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNV-RALAVERFDRRWERTRLPQED-CQTFGLPESDGPGIARI-AFL--GSSEALKDRYDF-KFQVFQWLIGATQGHAKNFSVFIQGGSYRLTPFYDIISAFPVLGGTGIHI-SDLKLA-GLASKGKKTA-IDKIYPRHFLATAKVLRFPEQ-HEILSDFAR-IPAALDNVKTEY-
6	HHPRED-g	3dnu_A	0.155	0.772	8.081	threading_6	------------------------P------KLVTW-NNQRVGELTKLAN----------GAHTFKYAPEWLASRYA---------RPLSLSLPLQRGNIDAVFNFFDNLLPDSPVRDRIVKRYHA-----------KSRQPFDLLSEIGRDSVGAVTLIPEDET----WEKLTEARLEEVLTAYKAD---------FRISVAGAQEKTALLRPKGITPTTHIIKLPI---------LSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNVR-ALAVERFDRRWERTRLPQED-CQTFGKYESDGGPGIARI-AFL-GSSEALKDRYDF-KFQVFQWLIGATQGHAKNFSVFIQGGSYRLTPFYDIISFPVLGGTGIHLKLA-GLASKGDKIYPRHFL---ATAKVLRFPEVQ--------HEILSDFAR-IPAALDNVKSLPT
7	SP3	2wiua	0.159	0.867	5.160	threading_7	-------------------------------------PKLVTWMNNQRVGELTKLANGAH---TFKYAPEWLASRYARPLSLS---LPLQRG----NITSDAVFNFFDNLLPDSPIVRDRIVKR----------YHAKSRQPFDLLSEIGRDSVGAVTLIPEDEHPIMAWEKLTEARLEEVLTAYDIPLGMIREENDFRISVAGAQEKTALLRIGNITPTTHIIKLPIGRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGN-VRALAVERFDRRWNAERLPQEDMCQTFGLPSSDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQWLIGATDGHAKNFSVFIAGGSYRLTPFYDIISAFPVLGGTG-IHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPVQMHEILSDFARMIPAALDNVKTSLP
8	SAM-T99	3fbrA	0.124	0.856	7.102	threading_8	---------------------------------------PKLVTWMNNQRVGELTKLAGAHTFKYAPEWLASRRPLSLSLPLQRGNITS-----------DAVFNFFDNLLPDSIVRDRIVKRYHA-----------KSRQPFDLLSEIGRDSVGAVTLIPEDETVTHPIMAWEKLTEARLEEVLTAYKADIREENDFRISVAGAQEKTALLRIGNGIPTTHIIKLPIGEQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAG-NVRALAVERFDRRTVLLRLPQEDMCQTFGLPSSVKYGIARIMAFLMGS-SEALKDRYDFMKFQVFQWLIGATQGHAKNFSVFIQAGGYRLTPFYDIISAFPVLGGTGIHISD-LKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTSL
9	MUSTER	3akjA	0.133	0.510	0.802	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTIDFTFCEINPNKISLFYNN---ELYMVKFPPT----------NGCFSEYVACHIVNSLGLKVQETLLGTYKN-KIVVACKDFTTH-QYELVDFLSLKNTMIELEKSGTNLNDVLYAIDNQFIEPKVLKCFFWDMFVADTLLGNFDRHNGNWGFLRASKEYQIAPIFDCGSCLYP-----QADDVVCQKVLSNIDELNARIYNFPQSINYYDFLTQTN--NKDCLDALLRIYPRMNKIHSIIDNTPF
10	SPARKS	3fbra	0.141	0.867	4.757	threading_10	-------------------------------------PKLVTWMNNQRVGELTKLANGAHTF---KYAPEWLASRYARPL-------SLSLPLQRGNITSDAVFNFFDNLLPDS---PIVRDRIVKRYH-------AKSRQPFDLLSEIGRDSVGAVTLIPEDETVTHPIMAWEKLTEARLEEVLTAYKADIREENDFRISVAGAQEKTALLRIGNITPTTHIIKLPIGRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNV-RALAVERFDRRWNAERLPQEDMCQTFGLPSSDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQWLIGATQGHAKNFSVFIAGGSYRLTPFYDIISAFPVLGGTG-IHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVMHEILSDFARMIPAALDNVKTSLP

Predicted Tertiary Structure


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TM-score=0.436 to 1cjaA SCOP code=d.144.1.3	TM-score=0.438 to 1cjaA SCOP code=d.144.1.3	TM-score=0.444 to 1cjaA SCOP code=d.144.1.3	TM-score=0.441 to 1cjaA SCOP code=d.144.1.3	TM-score=0.438 to 1cjaA SCOP code=d.144.1.3