Template-based Modeling Results for YJJK_ECOLI


  Submitted Primary Sequence

>Length 555
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
CCCEEEEEEEEEEECCCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCEECCCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHCCCCCCCHHHHHHCCCCEEEECCEEEEHHHHHHHHCCCHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
432100202200210223320021010002311100000111101000010001223213020102330200002321323333201200120023012003201300221232323023002101201210233201201010130031040232313022012101110000100133110000110121000200100130033030000000001100120011001011010011301021002112331232113221233103301210220131222213211220221122334433321101023133112200102201211221100210001024010000002100010000100112321330201003201000012223213322101210221121021232211012000301130222223122012121000100100222100000110122011300300120034030000000001100120011000022202011021102201211232112323233323233224
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
1MUSTER2ix8A40.2750.7872.342threading_1EGEDLCNCE-FSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQVDGFPT----QEECRTVYVEHDIDTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTDEIAPISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLE--FKFPEPGYLEGVKTKQ---KAIV------------KVTNE--------------------FQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAAHIESDKTPSEYIQVDKEALASGQFRPLIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVK-DGRTPSGH-N-----------------------------
2SPARKS2iwha0.2800.7846.369threading_2EGE-DLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIANGQVDGFP---TQEECRTVYVEHDDGTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTDIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSN-------------------------------------TDLEFKFPEPG-YLEGVKTKQKAIVKVTNMEFQYTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHHLDKTPSEYIQWGEDIFKIEGTRKEIEEHCSMLGLDPEIVSSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVK-DGRMTP---------------------------------
3PROSPECT22iw3A0.2760.7823.459threading_3DEGEDLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQVDGFPT----QEECRTVYVEHDIDTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTDEIAPISALSGGW-KKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLE--FKFPEPGYLEGVKTKQKA-----------------------------------IVKVTNEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHHLDKTPSEYIQEANKIFKIEGTPRRIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVKDGR-----------------------------------TP
4PPA-I2ix8A40.2600.7896.441threading_4DEGEDLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQVDGFPT----QEECRTVYVEHDIDTHSDTSVLDFVF-------------------------------------------ESGVGTKEAIKDKLIEFGFTDEIAPISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELS-------------------------------------NTDLEFKFPEPGYLEGVKTKQKAIVKVTNEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHHLDKTPSEYIQWDKEALASGQFRPLIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAV-KDGRTPSGHN------------------------------
5HHPRED-l2iw3_A0.2800.7712.795threading_5DEGEDLCNCEFSLAYG-AKILLNKTQLRLKRARRYGICGPNGCGKSTL-RAIANGQVD--GFP-TQEECRTVYVEHDIDTHSDTSVLDFVFE-------------------------------------------SGVGTKEAIKDKLIEFGFTD---PISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKA-------------------------------------YEELSNTDLEFKF-PEPGYLEGVKTKQKAIVKVTN-EFQYPGKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFASHLDKTPSEYIQWRFQGQFRPLTRKEIEEHCS-LGLDPEIVHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAVKDGR-TP----------------------------------
6HHPRED-g2iw3_A0.2900.7642.641threading_6DEGEDLCNCEFSLAYGA-KILLNKTQLRLKRARRYGICGPNGCGKSTL-RAIANGQVD--GF-PTQEECRTVYVEHDIDTHSDTSVLDFVFESG----------------V-GT----------KEAIKDKLIEFG--------------FTDE----PISALSGGWK-KLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKA-------------------------------------YEELSNTDL------EFKFPEPGKTKQKAIVKVTN-EFQYTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHILDKTPSEYIQTGEDRLASGQFRPEIEEHCS-LGLDPEVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEEVWAV-KDGR-TP---------------------------------
7SP31yqta0.2450.8615.759threading_7-------EEDCVHRYGVN--AFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNE---------------LQNYFEKLKN-GEIRPVVKPQYVDLIPKA----VKGKVIELLKKADETGKLEEVVKALELENLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLGKSVLVVEHDLAVLDYLSDIIHVVYGE-----PGVYGIFSQPKGTRNGINEFL----RGYLKDENVRFR--------------------------PYEIKFTKTGERVEIERETLVTYPRLVKDYGSFRLE-VEPGEIKKGEVIGIVGPNGIGKTTFVKLA-GVEEPTEGKIEWD--LTVAYKPQYI-KADYEGTVYELLS------KIDASKLNSNFYKTKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKTALVVEHDV-LIDYVSDRLV-FEGEPGKYGRALPPGREGNRFLASIGPDTGRPRKDREQKEKG
8SAM-T992ix8A40.2720.7873.933threading_8--GEDLCNCEFSLAY-GAKILLNKTQLRLKRARRYGICGPNGCGKSTLRAIANGQ---VDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFESGVGTKEAI-------------------------------------------KDKLIEFGFTDEIAPISALSGGWKK-LALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLEFKFPE-----PGYLEGVKTKQKAIVKVTNEFQYPGTSKPQ--------------------------------ITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHTDRANVAEVDKEALASGQFPLTRKEIEEHCSLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEF-------------------------------TKNLTEEVWAVKDGRTPSGHN
9MUSTER3bk7A0.2490.8812.260threading_9NAISIVNLEDCVHRYGVNA-FVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRG----NELQNYFERLKNG------------EIRPVVKPQYVDLLPKAVK-GKVRELLKKVDEVG---KFEEVVKELELENLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGE-----PGVYGIFSKPKGTRNGINEFLQG---------------YLKDENVRFRPYEIRFTKLSERVDVERE---------------TLVEYPRLVKDYGSF-KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT--VAYKPQYI-KAEYEGTVYELLSKI------DSSKLNSNFYKTELLKPIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEGRALPPMGMREGMNRFLASRRDPDSGRPRANKEGSKDR
10SPARKS1yqta0.2540.8436.044threading_10-------EEDCVHRYGVNA--FVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLC--------------------GDNDSWDGVIRAFRELQNYFEKLKEIRPVVKPQYVDLIPKAVK-GKVIELLKKADE---TGKLEEVVKALELENLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLEGSVLVVEHDLAVLDYLSDIIHVVYGE-----PGVYGIFSQPKGTRNGINEFL----RGYLKDE--------------------------NVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGSFRLE-VEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWD--LTVAYKPQYI-KADYEGTVYELLS------KIDASKLNSNFYKTELLKPIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKTALVVEHDV-LIDYVSDRLV-FEGEP------GKYGRALPPGREGNRFLASIGITFRRDPDTG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.543 to 1b0uA
SCOP code=c.37.1.12
TM-score=0.538 to 1b0uA
SCOP code=c.37.1.12
TM-score=0.552 to 1g6hA
SCOP code=c.37.1.12
TM-score=0.550 to 1g6hA
SCOP code=c.37.1.12
TM-score=0.540 to 1b0uA
SCOP code=c.37.1.12