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Can I submit customed alignment for protein structure prediction?

Posted: Wed Jan 03, 2024 8:33 am
by Huang Huang
Hi,
The protein I submitted don't have any homologs in any database. But i have some of the homologous sequence, so I want to know whether can I submit a alignment for structure prediction by D-I-TASSER.
Sincercely

Re: Can I submit customed alignment for protein structure prediction?

Posted: Fri Jan 05, 2024 9:54 am
by jlspzw
Dear user,

D-I-TASSER server using our huge metagenome sequence databases which can detect more homologous sequences than the usual MSA pipeline. So we didn't implement the customs MSA as input. We will consider it in the future.

Thank you.

Best Regards
IT Team