How much longer does it take for I-TASSER to generate each additional .pdb file?
Moderator: robpearc
How much longer does it take for I-TASSER to generate each additional .pdb file?
Hello! If I choose to generate, for example, 2 .pdb files instead of 1 .pdb file for my protein sequence with I-TASSER, how much longer should I expect for the modeling job to take? I am running I-TASSER on a local supercomputer with 14 CPUs. Thanks!
Re: How much longer does it take for I-TASSER to generate each additional .pdb file?
It depends on the length of the query protein and your running mode (parallel or unparallel ) for the threading and simulation. Results are usually available within 48 hours.