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itasser suite output

Posted: Wed Sep 20, 2023 5:00 am
by tingting
Dear,

I followed the thread for similar issue: viewtopic.php?f=3&t=721&sid=8816cacda68 ... 74368469ed

I didn't see illegal division anymore, but it's been 18 hours, analysis stays in the step with the seq.fasta in example:
4.1 run simulation
run 14 serial simulations
run simulation job 1 / 14

I want to ask
1. is it normal to take 20+ hours for a short sequence?
2. There are a lot of files generated, is there any README file to guide me on (1) how many files should there be, (2) how to understand the key files


Thanks
tingting

Re: itasser suite output

Posted: Thu Sep 28, 2023 8:53 pm
by jlspzw
Dear user,

I-TASSER simulation may take a long time based on the length of your sequence.
The final file for modeling should be model1.pdb in your folder. You can check the README file in the I-TASSER suite package (but there is no instruction about the number of immediate files).

Best
IT Team