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BioLiP
Download all results in tab-seperated text for 68 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4p99:A (1.8) BS01 CA ? GO:0046872 ... A0A075B5G5 24892750
    2 4p99:A (1.8) BS02 CA ? GO:0046872 ... A0A075B5G5 24892750
    3 4p99:A (1.8) BS03 CA ? GO:0046872 ... A0A075B5G5 24892750
    4 4p99:A (1.8) BS04 CA ? GO:0046872 ... A0A075B5G5 24892750
    5 4p99:A (1.8) BS05 CA ? GO:0046872 ... A0A075B5G5 24892750
    6 4p99:A (1.8) BS06 CA ? GO:0046872 ... A0A075B5G5 24892750
    7 4p99:A (1.8) BS07 CA ? GO:0046872 ... A0A075B5G5 24892750
    8 4p99:A (1.8) BS08 CA ? GO:0046872 ... A0A075B5G5 24892750
    9 4p99:A (1.8) BS09 CA ? GO:0046872 ... A0A075B5G5 24892750
    10 4p99:A (1.8) BS10 CA ? GO:0046872 ... A0A075B5G5 24892750
    11 4p99:A (1.8) BS11 CA ? GO:0046872 ... A0A075B5G5 24892750
    12 4p99:A (1.8) BS12 CA ? GO:0046872 ... A0A075B5G5 24892750
    13 4p99:A (1.8) BS13 CA ? GO:0046872 ... A0A075B5G5 24892750
    14 4p99:A (1.8) BS14 CA ? GO:0046872 ... A0A075B5G5 24892750
    15 4p99:A (1.8) BS15 CA ? GO:0046872 ... A0A075B5G5 24892750
    16 4p99:A (1.8) BS16 CA ? GO:0046872 ... A0A075B5G5 24892750
    17 4p99:A (1.8) BS17 CA ? GO:0046872 ... A0A075B5G5 24892750
    18 4p99:B (1.8) BS01 CA ? GO:0046872 ... A0A075B5G5 24892750
    19 4p99:B (1.8) BS02 CA ? GO:0046872 ... A0A075B5G5 24892750
    20 4p99:B (1.8) BS03 CA ? GO:0046872 ... A0A075B5G5 24892750
    21 4p99:B (1.8) BS04 CA ? GO:0046872 ... A0A075B5G5 24892750
    22 4p99:B (1.8) BS05 CA ? GO:0046872 ... A0A075B5G5 24892750
    23 4p99:B (1.8) BS06 CA ? GO:0046872 ... A0A075B5G5 24892750
    24 4p99:B (1.8) BS07 CA ? GO:0046872 ... A0A075B5G5 24892750
    25 4p99:B (1.8) BS08 CA ? GO:0046872 ... A0A075B5G5 24892750
    26 4p99:B (1.8) BS09 CA ? GO:0046872 ... A0A075B5G5 24892750
    27 4p99:B (1.8) BS10 CA ? GO:0046872 ... A0A075B5G5 24892750
    28 4p99:B (1.8) BS11 CA ? GO:0046872 ... A0A075B5G5 24892750
    29 4p99:B (1.8) BS12 CA ? GO:0046872 ... A0A075B5G5 24892750
    30 4p99:B (1.8) BS13 CA ? GO:0046872 ... A0A075B5G5 24892750
    31 4p99:B (1.8) BS14 CA ? GO:0046872 ... A0A075B5G5 24892750
    32 4p99:B (1.8) BS15 CA ? GO:0046872 ... A0A075B5G5 24892750
    33 4p99:B (1.8) BS16 CA ? GO:0046872 ... A0A075B5G5 24892750
    34 4p99:C (1.8) BS01 CA ? GO:0046872 ... A0A075B5G5 24892750
    35 4p99:C (1.8) BS02 CA ? GO:0046872 ... A0A075B5G5 24892750
    36 4p99:C (1.8) BS03 CA ? GO:0046872 ... A0A075B5G5 24892750
    37 4p99:C (1.8) BS04 CA ? GO:0046872 ... A0A075B5G5 24892750
    38 4p99:C (1.8) BS05 CA ? GO:0046872 ... A0A075B5G5 24892750
    39 4p99:C (1.8) BS06 CA ? GO:0046872 ... A0A075B5G5 24892750
    40 4p99:C (1.8) BS07 CA ? GO:0046872 ... A0A075B5G5 24892750
    41 4p99:C (1.8) BS08 CA ? GO:0046872 ... A0A075B5G5 24892750
    42 4p99:C (1.8) BS09 CA ? GO:0046872 ... A0A075B5G5 24892750
    43 4p99:C (1.8) BS10 CA ? GO:0046872 ... A0A075B5G5 24892750
    44 4p99:C (1.8) BS11 CA ? GO:0046872 ... A0A075B5G5 24892750
    45 4p99:C (1.8) BS12 CA ? GO:0046872 ... A0A075B5G5 24892750
    46 4p99:C (1.8) BS13 CA ? GO:0046872 ... A0A075B5G5 24892750
    47 4p99:C (1.8) BS14 CA ? GO:0046872 ... A0A075B5G5 24892750
    48 4p99:C (1.8) BS15 CA ? GO:0046872 ... A0A075B5G5 24892750
    49 4p99:C (1.8) BS16 CA ? GO:0046872 ... A0A075B5G5 24892750
    50 4p99:C (1.8) BS17 CA ? GO:0046872 ... A0A075B5G5 24892750
    51 4p99:C (1.8) BS18 CA ? GO:0046872 ... A0A075B5G5 24892750
    52 4p99:C (1.8) BS19 CA ? GO:0046872 ... A0A075B5G5 24892750
    53 4p99:D (1.8) BS01 CA ? GO:0046872 ... A0A075B5G5 24892750
    54 4p99:D (1.8) BS02 CA ? GO:0046872 ... A0A075B5G5 24892750
    55 4p99:D (1.8) BS03 CA ? GO:0046872 ... A0A075B5G5 24892750
    56 4p99:D (1.8) BS04 CA ? GO:0046872 ... A0A075B5G5 24892750
    57 4p99:D (1.8) BS05 CA ? GO:0046872 ... A0A075B5G5 24892750
    58 4p99:D (1.8) BS06 CA ? GO:0046872 ... A0A075B5G5 24892750
    59 4p99:D (1.8) BS07 CA ? GO:0046872 ... A0A075B5G5 24892750
    60 4p99:D (1.8) BS08 CA ? GO:0046872 ... A0A075B5G5 24892750
    61 4p99:D (1.8) BS09 CA ? GO:0046872 ... A0A075B5G5 24892750
    62 4p99:D (1.8) BS10 CA ? GO:0046872 ... A0A075B5G5 24892750
    63 4p99:D (1.8) BS11 CA ? GO:0046872 ... A0A075B5G5 24892750
    64 4p99:D (1.8) BS12 CA ? GO:0046872 ... A0A075B5G5 24892750
    65 4p99:D (1.8) BS13 CA ? GO:0046872 ... A0A075B5G5 24892750
    66 4p99:D (1.8) BS14 CA ? GO:0046872 ... A0A075B5G5 24892750
    67 4p99:D (1.8) BS15 CA ? GO:0046872 ... A0A075B5G5 24892750
    68 4p99:D (1.8) BS16 CA ? GO:0046872 ... A0A075B5G5 24892750
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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